Publications
2013
Journal
Alzheimers and Dementia, in press, 2013
Conference
Pattern Recognition (GCPR 2013), Springer, LNCS, Vol.8142: 215-224, 2013
Pattern Recognition (GCPR 2013), Springer, LNCS, Vol.8142: 205-214, 2013
Joint 3D Cell Segmentation and Classification in the Arabidopsis Root using Energy Minimization and Shape Priors
doi>
IEEE International Symposium on Biomedical Imaging (ISBI): 422--425, 2013
IEEE International Conference on Computer Vision and Pattern Recognition (CVPR), Jun 2013
IEEE International Conference on Computer Vision (ICCV), Dec 2013
IEEE International Conference on Computer Vision (ICCV), 2013
Blind deconvolution of widefield fluorescence microscopic data by regularization of the optical transfer function (OTF)
Paper

IEEE Conference on Computer Vision and Pattern Recognition (CVPR), 2013
IEEE Conference on Computer Vision and Pattern Recognition (CVPR), 2013
IEEE 10th International Symposium on Biomedical Imaging (ISBI): 169--172, 2013
2012
Journal
Sleep, in press, 2012
NeuroImage, 61(2): 457--463, Nov 2012
Nature Methods, 9(7): 735-742, 2012
Vertebrate kidney tubules elongate using a planar cell polarity–dependent, rosette-based mechanism of convergent extension
doi>
Nature Genetics, 44(12): 1382--1387, Dec 2012
Machine Vision and Applications, 23(3): 557-577, 2012
IET Systems Biology, 6(4): 143--153, 2012
IEEE Transactions on Signal Processing, 60(3): 1108 - 1120 , 2012
IEEE Transactions on Pattern Analysis and Machine Intelligence, 34(3): 493-505, 2012
Fast rotation invariant 3D feature computation utilizing efficient local neighborhood operators
doi>
Code/data

IEEE Transactions on Pattern Analysis and Machine Intelligence, 34(8): 1563 - 1575 , 2012
IEEE Transactions on Image Processing, 21(4): 1863-1873, 2012
Development, 139(24): 4571--4581, 2012
Conference
Pattern Recognition (Proc. DAGM), Springer, LNCS , 2012
Pattern Recognition (Proc. DAGM), Springer, LNCS, Vol.7476: 83--92, 2012
Pattern Recognition (Proc. DAGM), Springer, LNCS, 2012
IEEE International Symposium on Biomedical Imaging (ISBI): 1292 - 1295 , 2012
IEEE International Conference on Computer Vision and Pattern Recognition (CVPR), 2012
2D/3D Rotation-Invariant Detection using Equivariant Filters and Kernel Weighted Mapping
Paper
Code/data


IEEE Conference on Computer Vision and Pattern Recognition (CVPR), 2012
European Conference on Computer Vision (ECCV), Oct 2012
European Conference on Computer Vision (ECCV), Oct 2012
Others
Generation of high quality multi-view confocal 3D datasets of zebrafish larval brains suitable for analysis using Virtual Brain Explorer (ViBE-Z) software
doi>
Technical Report 22/06/2012, Nature Protocol Exchange(22/06/2012), 2012